feat: centralize application framework primitives

packages/cli/src/create.ts

@@ -93,7 +93,7 @@ Thumbs.db
     "doctor": "wrnexus doctor .",
     "analyze": "wrnexus analyze .",
     "inspect": "wrnexus inspect packages .",
-    "check": "bun run typecheck && bun run lint && bun run test && bun run format:check"
+    "check": "wrnexus check ."
   },
   "dependencies": {
     "@wrnexus/ai": "${scaffoldFrameworkRange}",
@@ -227,8 +227,13 @@ export default tseslint.config(
 dist/
 .wrnexus/
 **/.wrnexus/
+.superpowers/
+.claude/
 *.log
 CLAUDE.md
+app/routes.gen.ts
+app/types/*.generated.*
+app/db/queries.gen.ts
 `,
   ".editorconfig": `root = true